The problem of developing an exact form of the junction between the quantum
and classical parts in a hybrid QC/MM approach is considered. We start fro
m the full Hamiltonian for the whole system and assume a specific form of t
he electron wavefunction, which allows us to separate the electron variable
s relevant to the reactive (quantum) part of the system from those related
to the inert (classical) part. Applying the Lowdin partition to the full Ha
miltonian for the molecular system results in general formulae for the pote
ntial energy surfaces of a molecular system composed of different parts pre
sided some of these parts are treated quantum mechanically whereas others a
re treated with use of molecular mechanics. These principles of separating
electron variables have been applied to construct an efficient method for a
nalysis of electronic structure and d-electron excitation spectra of transi
tion metal complexes. This method has been also combined with the MM approx
imation in order to get a description for potential energy surfaces of the
complexes and to develop a consistent approach to the known problem of exte
nding molecular mechanics to transition metals.