RNA was isolated from 22 squamous cell carcinomas (SCCs) obtained from
diverse sites within the head and neck and from matched normal tissue
where available. Tissue samples were then screened for expression of
RNA from tumor suppressor gene p16 by utilizing semiquantitative rever
se transcriptase polymerase chain reaction (RT-PCR) analysis. p16-Spec
ific PCR amplification products generated from tumor samples were subj
ect to further analysis by direct DNA sequencing to determine if any t
umor sample harbored a p16 mutation. The results show the presence of
mutations in 10 of 22 (45%) of the tumor samples. Mutations comprise t
wo identical point mutations, two small deletions (1 bp and 2 bp), one
single-nucleotide insertion, four larger deletions, and an insertion/
deletion. No mutations in p16 have been identified by analysis of PCR
products generated from normal matched tissue, suggesting that p16 alt
erations are generated by somatic mutation and are not germline in ori
gin. All 22 samples were analyzed additionally by immunohistochemistry
for nuclear expression of the retinoblastoma (RB) tumor suppressor ge
ne product. Results show lack of RE nuclear expression in only one sam
ple, suggesting that mutation of RE is an infrequent event in the deve
lopment of SCC of the head and neck (SCCHN).