The thymic preference for CD4(+) T cells over CD8(+) T cells is often
attributed to a default pathway favouring CD4(+) T cells [1] or to hom
eostatic mechanisms [2,3] It is also clear, however, that T-cell recep
tor (TCR) preferences for major histocompatibility complex (MHC) class
I versus class II binding will strongly influence an individual clone
's skewing to the CD4 or CD8 subset [4] The variable region of each TC
R alpha chain (V alpha) studied to date is found to be overrepresented
in either CD4(+) [5-7] or CD8(+) cells [7-9], suggesting that each V
alpha element can Interact more favourably with either MHC class I or
class II molecules [10], Indeed, TCRs appear to have an intrinsic abil
ity to interact with MHC molecules [11,12], and single amino acid resi
dues present in germline-encoded complementarity determining region 1
(CDR1) and CDR2 of the V alpha element can be responsible for determin
ing MHC specificity [13]. Interestingly, the degree of CD4/CD8 skewing
is variable among different mouse strains [14,15] and in human popula
tions [16], Here, we have shown that polymorphism in CD4/CD8 skewing b
etween Be and BALB/c mice is determined by the stem cell genotype and
not by environmental effects, and that it maps in or near the TCR alph
a-chain complex, Tcra, This was confirmed by comparing Tcra(b) with Tc
ra(a) or Tcra(c) haplotypes in congenic mice. We propose that the arra
y of V alpha genes in various Tcra haplotypes exerts influence over th
e proportion of CD4 and CD8 subsets generated and may account in part
for the observed thymic skewing. Thus, while it has been suggested tha
t the TCR genes have been selected by evolution for MHC binding, our r
esults further indicate selection for class II MHC preference.