J. Boyes et al., PERTURBATION OF NUCLEOSOME STRUCTURE BY THE ERYTHROID TRANSCRIPTION FACTOR GATA-1, Journal of Molecular Biology, 279(3), 1998, pp. 529-544
The ability of transcription factors to gain access to their sites in
chromatin requires the disruption or displacement of nucleosomes cover
ing the promoter, signalled by the generation of a nuclease hypersensi
tive site. We characterise here the alterations in nucleosome structur
e caused by binding of the erythroid factor GATA-1 to a nucleosome car
rying GATA-1 sites. DNase I and micrococcal nuclease probes show that
GATA-1 binding causes extensive, cooperative breakage of the histone/D
NA contacts to generate a complex very similar to that formed by the f
actor with free DNA. The only region which differs is confined to abou
t 50 bp surrounding the nucleosome dyad axis which appears to be the d
omain of residual contact between the DNA and histone octamer. Despite
considerable breakage of the histone/DNA contacts, the complex is com
pletely stable in solution, and disruption of the nucleosome is entire
ly reversible: it is regenerated quantitatively upon removal of the tr
anscription factor. Moreover, the histone 2A/2B component of the octam
er does not exchange to external competitor. We suggest that formation
of this complex may be a step in the generation of a fully hypersensi
tive site in viva over regulatory elements containing GATA family bind
ing sites. (C) 1998 Academic Press Limited.