CHROMATIN REMODELING OF THE INTERLEUKIN-2 GENE - DISTINCT ALTERATIONSIN THE PROXIMAL VERSUS DISTAL ENHANCER REGIONS

Citation
Sb. Ward et al., CHROMATIN REMODELING OF THE INTERLEUKIN-2 GENE - DISTINCT ALTERATIONSIN THE PROXIMAL VERSUS DISTAL ENHANCER REGIONS, Nucleic acids research, 26(12), 1998, pp. 2923-2934
Citations number
69
Categorie Soggetti
Biology
Journal title
ISSN journal
03051048
Volume
26
Issue
12
Year of publication
1998
Pages
2923 - 2934
Database
ISI
SICI code
0305-1048(1998)26:12<2923:CROTIG>2.0.ZU;2-C
Abstract
Known transcription factor-DNA interactions in the minimal enhancer of the murine interleukin-2 gene (IL-2) do not easily explain the T cell specificity of IL-2 regulation. To seek additional determinants of ce ll type specificity, in vivo methodologies were employed to examine ch romatin structure 5' and 3' of the 300 bp IL-2 proximal promoter/enhan cer region. Restriction enzyme accessibility revealed that until stimu lation the IL-2 proximal promoter/enhancer exists in a closed conforma tion in resting T and non-T cells alike, Within this promoter region, DMS and DNase I genomic footprinting also showed no tissue-specific di fferences prior to stimulation, However, DNase I footprinting of the d istal -600 to -300 bp region revealed multiple tissue-specific and sti mulation-independent DNase I hypersensitive sites. Gel shift assays de tected T cell-specific complexes binding within this region, which inc lude TCF/LEF or HMG family and probable Oct family components, Upon st imulation, new DNase I hypersensitive sites appeared in both the proxi mal and distal enhancer regions, implying that there may be a function al interaction between these two domains. These studies indicate that a region outside the established IL-2 minimal enhancer may serve as a stable nucleation site for tissue-specific factors and as a potential initiation site for activation-dependent chromatin remodeling.