The prognosis of tuberculous meningitis (TBM) depends on early therapy
based on rapid diagnosis.To study the clinical value of PCR in diagno
sis of TBM, we investigated CSF specimens from 49 patients. After cell
lysis and DMA preparation following a standard protocol,we performed
a half-nested PCR with primers able to detect mycobacterial DNA. PCR r
esults were evaluated according to clinical features, histopathologica
l data, and bacteriological results. PCR detected four of five cases o
f confirmed TBM, corresponding to a sensitivity of 80%. Positive PCRs
were also obtained in 25% CSF samples of non-TBM patients. Most of the
se false positive results were due to amplification of Mycobacteria fo
rtuitum (M. fortuitum) as determined by direct sequencing analysis.ro
enhance specificity of our half nested protocol,the oligonucleotide pr
imers that were specific for several mycobacterial subspecies were sub
stituted by a primerpair,which allows selective amplification of DNA f
rom Mycobacteria tuberculosis (M.tuberculosis).By using the altered PC
R protocol, the screening of CSF samples revealed a much higher specif
icity (97%) and constant sensitivity (80%) in diagnosis of TBM.These f
indings indicate, that Nl.fortuitum,as an ubiquitous mycobacterial sub
type of low pathogenicity, can potentially contaminate clinical specim
ens and account for false positive PCR results.Therefore, the clinical
value of PCR in diagnosis of TBM strongly depends on appropriate olig
onucleotide primers, that allow to differentiate between mycobacterial
subtypes.