L. Bertrand et al., MUTAGENESIS OF THE FRUCTOSE-6-PHOSPHATE-BINDING SITE IN THE 2-KINASE DOMAIN OF 6-PHOSPHOFRUCTO-2-KINASE FRUCTOSE-2,6-BIPHOSPHATASE/, European journal of biochemistry, 254(3), 1998, pp. 490-496
Multiple alignment of several isozyme sequences of the bifunctional en
zyme phosphofructo-2-kinase/fructose-2,6-bisphosphatase revealed conse
rved residues in the 2-kinase domain. Among these residues, three aspa
ragine residues (Asn76, Asn97 and Asn133; numbering refers to the live
r isozyme sequence) and three threonine residues (Thr132, Thr134 and T
hr135) are located near the fructose 6-phosphate-binding site in the c
rystal structure of the bifunctional enzyme. The role of these residue
s in substrate binding and catalysis in the 6-phosphofructo-2-kinase d
omain has been studied by mutagenesis to alanine. Since the crystal st
ructure of 6-phosphofructo-2-kinase does not contain fructose 6-phosph
ate, this substrate was docked into the putative binding site by compu
ter modelling, and its interactions with the protein were predicted. A
nalysis of the mutagenesis-induced changes in kinetic properties and o
f the substrate-docking model revealed that all these residues are dir
ectly or indirectly involved in fructose-6-phosphate binding. All the
mutants displayed an increased K-m for fructose 6-phosphate (10-200-fo
ld). We propose that Asn133 stabilises Arg138, which itself makes a di
rect electrostatic bond with the 6-phosphate group of fructose 6-phosp
hate, that Asn76 interacts with the C3 hydroxyl group of fructose 6-ph
osphate, that Thr132 makes a hydrogen bond with the C6 oxygen of this
substrate, and that Thr134 interacts with two residues involved in fru
ctose-6-phosphate binding, Thr132 and Tyr199. On the other hand, Asn97
and Thr135 play structural roles, by maintaining the structure of the
fructose-6-phosphate binding pocket.