Ms. Deming et al., RIBONUCLEASE K6 - CHROMOSOMAL MAPPING AND DIVERGENT RATES OF EVOLUTION WITHIN THE RNASE-A GENE SUPERFAMILY, PCR methods and applications, 8(6), 1998, pp. 599-607
We have localized the gene encoding human RNase k6 to within similar t
o 120 kb on the long (q) arm of chromosome 14 by HAPPY mapping. With t
his information, the relative positions of the six human RNase A ribon
ucleases that have been mapped to this locus can be inferred. To furth
er our understanding of the individual lineages comprising the RNase A
superfamily, we have isolated and characterized 10 novel genes orthol
ogous to that encoding human RNase k6 from Great Ape, Old World, and N
ew World monkey genomes. Each gene encodes a complete ORF with no less
than 86% amino acid sequence identity to human RNase k6 with the eigh
t cysteines and catalytic histidines (H-15 and H-123) and lysine (K-38
) typically observed among members of the RNase A superfamily. interes
ting trends include an unusually low number of synonymous substituions
(K-s) observed among the New World monkey RNase k6 genes. When consid
ering nonsilent mutations, RNase k6 is a relatively stable lineage, Wi
th a nonsynonymous substitution rate of 0.40 x 10(-9) nonsynonymous su
bstitutions/nonsynonymons site/year (ns/ns/yr). These results stand in
contrast to those determined for the primate orthologs of the two clo
sely related ribonucleases, the eosinophil-derived neurotoxin (EDN) an
d eosinophil cationic protein (ECP), which have incorporated nonsilent
mutations at very rapid rates (1.9 x 10(-9) and 2.0 x 10(-9) ns/ns/yr
, respectively). The uneventful trends observed for RNase k6 serve to
spotlight the unique nature of EDN and ECP and the unusual evolutionar
y constraints to which these two ribonuclease genes must be responding
.