Td. Colby et al., ACTIVE-SITE MODIFICATIONS IN A DOUBLE MUTANT OF LIVER ALCOHOL-DEHYDROGENASE - STRUCTURAL STUDIES OF 2 ENZYME-LIGAND COMPLEXES, Biochemistry, 37(26), 1998, pp. 9295-9304
The oxidation of alcohol to aldehyde by horse liver alcohol dehydrogen
ase (LADH) requires the transfer of a hydride ion from the alcohol sub
strate to the cofactor nicotinamide adenine dinucleotide (NAD). A quan
tum mechanical tunneling contribution to this hydride transfer step ha
s been demonstrated in a number of LADH mutants designed to enhance or
diminish this effect [Bahnson, B. J., et al. (1997) Proc. Natl. Acad.
Sci. U.S.A. 94, 12797-12802]. The active site double mutant Phe(93) -
-> Trp/Val(203) --> Ala shows a 75-fold reduction in catalytic efficie
ncy relative to that of the native enzyme, and reduced tunneling relat
ive to that of either single mutant. We present hen two crystal struct
ures of the double mutant: a 2.0 Angstrom complex with NAD and the sub
strate analogue trifluoroethanol and a 2.6 Angstrom complex with the i
sosteric NAD analogue CPAD and ethanol. Changes at the active site obs
erved in both complexes are consistent with reduced activity and tunne
ling. The NAD-trifluoroethanol complex crystallizes in the closed conf
ormation characteristic of the active enzyme. However, the NAD nicotin
amide ring rotates away from the substrate, toward the space vacated b
y replacement of Val(203) with the smaller alanine. Replacement of Phe
(93) with the larger tryptophan also produces unfavorable steric conta
cts with the nicotinamide carboxamide group, potentially destabilizing
hydrogen bonds required to maintain the closed conformation. These co
ntacts are relieved in the second complex by rotation of the CPAD pyri
dine ring into an unusual syn orientation. The resulting loss of the c
arboxamide hydrogen bonds produces an open conformation characteristic
of the apoenzyme.