STRUCTURE AND TAUTOMERIC PROPERTIES OF THYMINE DERIVATIVES GENERATED BY HYDROXYL RADICAL IN AEROBIC CONDITIONS

Citation
P. Cysewski et al., STRUCTURE AND TAUTOMERIC PROPERTIES OF THYMINE DERIVATIVES GENERATED BY HYDROXYL RADICAL IN AEROBIC CONDITIONS, Journal of the Chemical Society. Faraday transactions (Print), 94(13), 1998, pp. 1813-1821
Citations number
35
Categorie Soggetti
Chemistry Physical","Physics, Atomic, Molecular & Chemical
ISSN journal
09565000
Volume
94
Issue
13
Year of publication
1998
Pages
1813 - 1821
Database
ISI
SICI code
0956-5000(1998)94:13<1813:SATPOT>2.0.ZU;2-D
Abstract
The tautomeric properties of five hydroxyl radical-induced thymine der ivatives: thymine glycol (1), 5-formyldeoxyuracil (2), 5-hydroxymethyl uracil (3), N-tatronyluridine (4) and 5-hydroxymethylhydantoine (5) we re characterised by ab initio HF (6-311G*), MP2 (6-311G**) and SCI-PC M (6-311G*) quantum chemistry calculations. Amongst all the tautomers of 1 the I-5eq6ax tautomer (the diketo form with C-5 equatorial and C -6 axial orientations of the hydroxy groups) is the most stable, in bo th polar and non-polar environments. The most stable tautomer of 2 is the diketo form with the carbonyl group oriented in such a way that th e maximum distance between O-4 and O-C'5 oxygen atoms is preserved. By analogy, the preferred tautomeric form of 3 corresponds to the diketo isomer. Among the potential 43 isomers of 4 the most stable is that i n the diketo-amino form with anti-conformation of the C-2-N-3-C-4-C-5 torsion angle and equatorial conformation of the C-5 chirality centre. Finally, the most probable structure of 5 is the diketo tautomeric fo rm.