Ls. Jeong et al., CARBOCYCLIC ANALOGS OF THE POTENT CYTIDINE DEAMINASE INHIBITOR -(BETA-D-RIBOFURANOSYL)-1,2-DIHYDROPYRIMIDIN-2-ONE (ZEBULARINE), Journal of medicinal chemistry, 41(14), 1998, pp. 2572-2578
Three carbocylic analogues of the potent cytidine deaminase inhibitor
(CDA) zebularine [1-(beta-D-ribofuranosyl)-1,2-dihydropyrimidin-2- one
-, 1a] were synthesized. The selected pseudosugar templates correspond
, respectively, to the cyclopentenyl moiety of neplanocin A (compound
4), the cyclopentyl moiety of aristeromycin (compound 5), and a newly
designed, rigid bicyclo[3.1,0]hexane moiety (compound 6). These three
carba-nucleoside versions of zebularine were fashioned to overcome the
inherent instability of the parent drug. Each target compound was app
roached differently using either convergent or linear approaches. The
immediate precursor to the cyclopentenyl analogue 4 was obtained by a
Mitsunobu coupling of pseudosugar 7 with 2-hydroxypyrimidine. The cycl
opentyl analogue 5 was linearly constructed from carbocyclic amine 17,
and the final target 6 was similarly constructed from the carbobicycl
ic amine 27. Of the three target compounds, only 5 showed a significan
t level of inhibition against human CDA, but it was 16 times less pote
nt than zebularine (K-i = 38 mu M vs K-i(apparent) = 2.3 mu M). Althou
gh these carbocyclic analogues appeared to be more stable than zebular
ine, replacement of the electronegative CO4' oxygen for the less elect
ronegative carbon in 4-6 presumably reduces the capacity of the pyrimi
din-2(1H)-one ring to form a covalent hydrate, a step considered cruci
al for the compound to function as a transition-state inhibitor of the
enzyme.