EFFECT OF DNA PREPARATION FROM LAVER (PORPHYRA-YEZOENSIS) THALLI ON REPRODUCIBILITY OF RAPD (RANDOM AMPLIFIED POLYMORPHIC DNA) PATTERNS

Citation
Y. Mizukami et al., EFFECT OF DNA PREPARATION FROM LAVER (PORPHYRA-YEZOENSIS) THALLI ON REPRODUCIBILITY OF RAPD (RANDOM AMPLIFIED POLYMORPHIC DNA) PATTERNS, Journal of applied phycology, 10(1), 1998, pp. 23-29
Citations number
15
Categorie Soggetti
Biothechnology & Applied Migrobiology","Marine & Freshwater Biology
ISSN journal
09218971
Volume
10
Issue
1
Year of publication
1998
Pages
23 - 29
Database
ISI
SICI code
0921-8971(1998)10:1<23:EODPFL>2.0.ZU;2-N
Abstract
Laver (Porphyra yezoensis) DNAs were extracted from thalli with five d ifferent procedures and used for RAPD (random amplified polymorphic DN A) analysis as templates. Restriction enzyme-digestive DNAs were obtai ned with all procedures examined. However, RAPD patterns generated wit h these DNAs appeared highly irreproducible and were considerably diff erent from each other. When DNAs purified with CsCl gradient centrifug ation were used for RAPD analysis as templates, highly reproducible RA PD patterns were obtained, suggesting that unpurified DNAs extracted f rom thalli with all five extraction procedures contained an excess of RNA, polysaccharides and/or other materials which affected the RAPD re producibility. Thus, results indicated that purification of DNA is ess ential to produce reproducible RAPD patterns of Porphyra DNA.