We used molecular techniques to examine the ectomycorrhizal fungal com
munity associated with pinyon pine (Pinus edulis) growing in two soil
types in a semiarid region of northern Arizona: cinder soils low in nu
trients and moisture, and sandy-loam soils with higher moisture and nu
trient levels. Pinyon performance (e.g., growth, reproduction, water s
tress) has been shown to be markedly lower in cinder than in sandy-loa
m environments. Fungal community composition and richness were determi
ned using RFLP (restriction fragment length polymorphism) analysis of
ectomycorrhizal root tips collected from three sites within each soil
type. Several patterns emerged from these analyses. First, communities
in both cinder and sandy-loam soils were dominated by one or a few ab
undant ectomycorrhizal types, a species abundance pattern common to ma
ny plant and animal communities. Second, unlike the pattern for many o
ther organisms, ectomycorrhizal fungal type (species) richness was not
correlated with measures of ecosystem productivity such as soil nutri
ent and moisture levels; cinder and sandy-loam soils had similar numbe
rs of ectomycorrhizal fungal types (range of 15-19 fungal types for bo
th soil types). Third, soil type and fungal community composition were
linked, as cluster analysis demonstrated greater similarity of fungal
communities from sites within soil types than between them. Different
ial amplification using primers with enhanced specificity for basidiom
ycetes indicated that an average of 85% of the ectomycorrhiza found at
the sandy-loam sites were members of the subphylum Basidiomycotina, w
hereas over half (mean = 52%) of the ectomycorrhiza at the cinder site
s were formed by members of other fungal groups, probably the subphylu
m Ascomycotina. Fourth, a preliminary survey of 14-45 ectomycorrhizal
root tips from each of 20 trees at one cinder site indicated that tree
s were dominated by one or a few ectomycorrhizal RFLP types. However,
the same RFLP types did not dominate on all trees, and dominant types
showed considerable spatial variation. Fifth, the RFLP patterns of som
e fungal sporocarps matched those of ectomycorrhizal root tips, but ma
ny did not, indicating that many of the ectomycorrhizal fungi at these
sites fruit infrequently, whereas other fungi with more abundant spor
ocarps may not form ectomycorrhiza. This emphasizes the need to charac
terize the ectomycorrhizal communities formed on the plant roots thems
elves, rather than characterization based on sporocarps alone, particu
larly in arid environments. Finally, the differences in ectomycorrhiza
l fungal communities we observed between soil types supported the conc
ept that conserving fungal diversity requires conservation of host pla
nt species over their entire range, not just typical sites. If future
studies corroborate these patterns, our results suggest that abiotical
ly stressful environments are important to include in these conservati
on efforts.