The HLA DR and DQ class II genes are in strong linkage disequilibrium
and recombinaton is quite rare. However, many different DR-DO haplotyp
es appear to have developed during evolution, giving rise to a variety
of combinations with different distributions in populations. In the p
resent report, 138 subjects from North India were studied for the alle
les of HLA-DRB1, DRB3, DRB5, DQB1 and DQA1 loci using PCR-oligotyping.
The probable haplotypes were constructed based on two-locus associati
ons observed in this population A frequent haplotype in this populatio
n, DRB11501-DRB5*0101-DQA1*0103-DQB1*0601, has been reported very rar
ely in other ethnic groups. Other DR2 haplotypes, like DRB11502-DRB5*
0102-DQA10103-DQB1*0601, earlier reported in Caucasians, Chinese and
Latin Americans, and DRB11502-DRB5*0102-DQA1*0103-DQB1*0503, earlier
reported in Gypsies, were also observed. A relatively rare haplotype i
n Caucasians which was earlier reported in Gypsies from the Czech Repu
blic, DRB11404-DRB3*0202-DQA1*0101-DQB1*0503, was observed frequently
in Indians, suggesting the probable migration of Gypsies from India T
he results suggest that the North Indian population contains a mixture
of Caucasoid, Black and Chinese genes. Similarities with Gypsies and
South-East Asian populations suggest the role of ancient migrations fr
om India.