The role of susceptibility genes in the etiology of birth defects is u
nclear, but may involve in some cases multiple alleles at multiple loc
i. We suggest a simple epidemiologic approach to explore gene-gene int
eractions, and use it to reevaluate data from a recent case-control st
udy on the possible association of neural tube defects (NTDs) with spe
cific mutations of two genes, 5,10-methylene-tetrahydrofolate reductas
e (MTHFR) and cystathionine-beta synthase (CBS). We found that, compar
ed with the common genotype, homozygosity for the MTHFR mutation alone
was associated with a two-fold increased risk for NTDs, while homozyg
osity for the CBS mutation alone was not a risk factor. However, homoz
ygous individuals for the mutations at both loci had a five-fold great
er risk for NTDs than those with the reference genotype. Though the or
iginal study was too small to detect statistically significant differe
nces among most of the risk estimates, these results, if confirmed by
independent and larger studies, suggest that gene-gene interaction may
play a role in modulating the susceptibility to NTDs in a proportion
of affected individuals. This approach, moreover, could be a valuable
adjunct to the study of gene-gene interactions in the etiology of huma
n disease.