T. Hayashi et al., KINETIC AND THERMODYNAMIC ANALYSIS OF INDUCED-FIT MOLECULAR RECOGNITION BETWEEN TETRAARYLPORPHYRIN AND UBIQUINONE ANALOGS, Chemistry (Weinheim), 4(7), 1998, pp. 1266-1274
meso-Tetrakis(2-hydroxy-4-nonylphenyl)porphyrin (1), which was prepare
d as a host molecule for ubiquinone analogues, comprises four atropiso
mers, alpha alpha alpha alpha, alpha alpha alpha beta, alpha alpha bet
a beta, and alpha beta alpha beta, in a statistical ratio of 1:4:2:1,
respectively. The atropisomerization is due to internal rotation about
the C(aryl)-C(porphyrin) bonds and is observed even at room temperatu
re, A rate constant for the rotation was determined (k = 1.73 x 10(-5)
s(-1) in CHCl3 at 25 degrees C). UV/visible spectrophotometric titrat
ion of tetramethoxy-p-benzoquinone (3) against 1(alpha alpha alpha alp
ha) or 1(alpha alpha alpha beta) in CHCl3 at 25 degrees C showed 1:1 c
omplexation with association constants of (9.4 +/- 0.1) x 10(3) and (3
.5 +/- 0.1) x 10(2) M-1, respectively. Upon addition of 3 to a solutio
n of 1 in CDCl3, the proportion of 1(alpha alpha alpha alpha) in the a
tropisomeric mixture increased and that of the other three isomers dec
reased over 500 h. At equilibrium the proportion of 1(alpha alpha alph
a alpha) reached 78% in the presence of 3 (3 equiv); this showed that
atropisomerization is induced by complexation with 3, An atropisomeric
shift to 1(alpha alpha alpha alpha) was also observed upon addition o
f 2,3-dimethoxy-p-benzoquinone (4); however, the proportion of 1 alpha
alpha alpha alpha was only 30% at equilibrium, since the difference i
n binding affinities between 1(alpha alpha alpha alpha)-4 and 1(alpha
alpha alpha beta)-4 complexes is relatively small compared with that b
etween 1(alpha alpha alpha alpha)-3 and 1(alpha alpha alpha beta)-3 co
mplexes. Nickel and zinc porphyrins. 1.Ni and 1.Zn, also showed induce
d-fit interaction with 3. The atropisomeric shift to 1(alpha alpha alp
ha alpha).Ni upon addition of 3 was completed within Ih. whereas guest
-induced atropisomerization in 1.Zn was much slower than in free base
1. The observed changes in the relative amounts of the four atropisome
rs are identical with the simulated changes calculated from multiple e
quilibrium systems by use of kinetic and thermodynamic parameters. Thi
s system is a suitable model for induced-fit molecular recognition in
flexible enzymes.