CONFORMATIONAL INVESTIGATION OF ALPHA,BETA-DEHYDROPEPTIDES - IX - N-ACETYL-(E)-ALPHA,BETA-DEHYDROBUTYRINE N'-METHYLAMIDE - STEREOELECTRONICPROPERTIES FROM INFRARED AND THEORETICAL-STUDIES
Ma. Broda et al., CONFORMATIONAL INVESTIGATION OF ALPHA,BETA-DEHYDROPEPTIDES - IX - N-ACETYL-(E)-ALPHA,BETA-DEHYDROBUTYRINE N'-METHYLAMIDE - STEREOELECTRONICPROPERTIES FROM INFRARED AND THEORETICAL-STUDIES, The journal of peptide research, 52(1), 1998, pp. 72-79
The Fourier transform infrared spectra of Ac-(E)-Delta Abu-NHMe were a
nalyzed to determine the predominant solution conformation(s) of this
(E)-alpha,beta-dehydropeptide-related compound and the electron densit
y perturbation in its amide groups. The measurements were performed in
dichloromethane and acetonitrile in the region of mode v(S) (N-H), am
ide I, amide II and v(S) (C-alpha = C-beta). The equilibrium geometric
al parameters, calculated by a method based on the density functional
theory with the B3LYP functional and the 6-31G basis set, were used t
o support spectroscopic interpretation and gain some deeper insight in
to the molecule. The experimental and theoretical data were compared w
ith those of three previously described molecules: isomeric Ac-(Z)-Del
ta Abu-NHMe, Ac-Delta Ala-NHMe, which is deprived of any P-substituent
, and saturated species Ac-Abu-NHMe. The titled compound assumes two c
onformational states in equilibrium in the DCM solution. One conformer
is extended almost fully and like Ac-Delta Ala-NHMe is Cg hydrogen-bo
nded. The other adopts a warped C-5 structure similar to that of Ac-(Z
)-Delta Abu-NHMe. The C-5 hydrogen bond, unlike the H-bond in Ac-Delta
Ala-NHMe, is disrupted by acetonitrile. The resonance within the N-te
rminal amide groups in either of the (E)-Delta Abu conformers is not a
s well developed as the resonance in Ac-Abu-NHMe. However, these N-ter
minal groups, compared with the other unsaturated compounds, constitut
e better resonance systems in each conformationally related couple: th
e C-5 hydrogen-bonded Ac-(E)-Delta Abu-NHMe/Ac-Delta Ala-NHMe and the
warped C-5 Ac-(E)-Delta AbuNHMe/Ac-(Z)-Delta Abu-NHMe. The resonance w
ithin the C-terminal groups of the latter couple apparently is similar
, but less developed than the resonance in Ac-Abu-NHMe. The electron d
istribution within the C-terminal group of the hydrogen-bonded C-5(E)-
Delta Abu conformer apparently is determined mainly by the electron in
flux from the C-alpha=C-beta double bond.