POPULATION-STRUCTURE OF FUSARIUM-OXYSPORUM F SP LYCOPERSICI - RESTRICTION-FRAGMENT-LENGTH-POLYMORPHISMS PROVIDE GENETIC-EVIDENCE THAT VEGETATIVE COMPATIBILITY GROUP IS AN INDICATOR OF EVOLUTIONARY ORIGIN
Ks. Elias et al., POPULATION-STRUCTURE OF FUSARIUM-OXYSPORUM F SP LYCOPERSICI - RESTRICTION-FRAGMENT-LENGTH-POLYMORPHISMS PROVIDE GENETIC-EVIDENCE THAT VEGETATIVE COMPATIBILITY GROUP IS AN INDICATOR OF EVOLUTIONARY ORIGIN, Molecular plant-microbe interactions, 6(5), 1993, pp. 565-572
A worldwide collection of 47 isolates of Fusarium oxysporum f. sp. lyc
opersici, of two physiological races, and eight isolates of other form
ae speciales of F. oxysporum were subjected to DNA restricion fragment
length polymorphism (RFLP) analysis. Fifty genomic clones from a libr
ary produced from an isolate of F. o. f. sp. lycopersici (FRC 0-1078,
race 2) were used individually as probes in Southern hybridizations wi
th DNA of the 55 isolates digested with four restriction enzymes. From
the hybridization pattern observed after a high-stringency wash, it w
as estimated that the genome of F. o. f. sp. lycopersici is composed o
f 68, 12, and 20% single-copy, multiple-copy, and repetitive DNAs, res
pectively. Two clones were identified that were specific to vegetative
compatibility group (VCG) 0030, the major VCG of F. o. f. sp. lycoper
sici, and another two clones differentiated F. o. f. sp. lycopersici f
rom the other formae speciales. RFLP patterns were recorded as phenoty
pes, and a dendrogram was constructed based on cluster analysis of sim
ilarity coefficients using the unweighted pair-group method with arith
metic average. A principal components analysis revealed the relatednes
s of each isolate. Results indicate that isolates within each VCG are
clonal derivatives of a common ancestor, and that races arose independ
ently within each VCG. In addition, there is evidence to suggest that
mutations have occurred in vegetative incompatibility loci, resulting
in many single-member VCG isolates (VCG 003-) that cluster with VCGs.
RFLP analysis of total genomic DNA reveals that the VCG can be a relia
ble indicator of evolutionary origin and population structure of F. ox
ysporum.