Molecular cytogenetics by fluorescence in situ hybridization (FISH) an
d comparative genomic hybridization (CGH) complements metaphase cytoge
netics in the analysis of genetic changes in malignancy. By FISH, defi
ned numerical and structural aberrations can be detected even in fixed
interphase cells. Thus, interphase FISH enables researchers to cytoge
netically analyse tumors which are only available in preserved form (e
. g., in paraffin) or of which evaluable metaphases could not be obtai
ned by labor intensive cell culturing. By CGH, the entire genome of tu
mor cells can be screened for chromosomal imbalancies as indicated by
gains and losses of tumor DNA. In this review, the techniques of molec
ular cytogenetics are detailed, and recent findings in hematological m
alignancies are summarized, with particular focus on implications for
diagnosis and prognostic assessment. Interphase FISH proved valuable n
ot only to sensitively detect chromosomal changes pathognomic for acut
e myelogenous leukemia, but also to provide novel insights into cytoge
netic abnormalities of chronic lymphocytic leukemia and multiple myelo
ma. In these diseases, previously underestimated chromosomal abnormali
ties (in particular deletions of p53 gene and 11q) were shown to be of
major prognostic si,significance. Furthermore, recent studies indicat
e that FISH may also be of value for the management of patients with c
hronic myelogenous leukemia.