Recently, iv formulated direct thrombin inhibitors have been shown to
be safe and efficacious alternatives to heparin. These results have fu
eled the hopes for an orally active compound. Such a compound could be
a significant advance over warfarin if it had predictable pharmacokin
etics and a duration of action sufficient for once or twice a day dosi
ng, in order to develop an orally active compound which meets these cr
iteria, the deficiencies of the prototype inhibitor efegatran have had
to be addressed. First, using a combination of structure based design
and empirical structure optimization, more selective compounds have b
een identified by modifying the PI group or by incorporating different
peptidomimetic P2/P3 scaffolds. Secondly, this optimization has resul
ted in the development of potent and selective non-covalent inhibitors
, thus bypassing the liabilities of the serine trap. Thirdly, oral bio
availability has been achieved while maintaining selectivity and effic
acy through the incorporation of progressively less basic P1 groups. T
he duration of action of these compounds remains to be optimized. Othe
r advances in thrombin inhibitor design have included the development
of uncharged P1 groups and the discovery of two non-peptide templates.