E. Holmes et al., DEVELOPMENT OF A MODEL FOR CLASSIFICATION OF TOXIN-INDUCED LESIONS USING H-1-NMR SPECTROSCOPY OF URINE COMBINED WITH PATTERN-RECOGNITION, NMR in biomedicine, 11(4-5), 1998, pp. 235-244
Citations number
26
Categorie Soggetti
Radiology,Nuclear Medicine & Medical Imaging",Spectroscopy,Biophysics
Pattern recognition approaches were developed and applied to the class
ification of 600 MHz H-1 NMR spectra of urine from rats dosed with com
pounds that induced organ-specific damage in either the liver or kidne
y. Male rats were separated into groups (n = 5) and each treated with
one of the following compounds; adriamycin, allyl alcohol, 2-bromoetha
namine hydrobromide, hexachlorobutadiene, hydrazine, lead acetate, mer
cury II chloride, puromycin aminonucleoside, sodium chromate, thioacet
amide, 1,1,2-trichloro-3,3,3-trifluoro-1-propene or dose vehicle. Urin
e samples were collected over a 7 day time-course and analysed using 6
00 MHz H-1 NMR spectroscopy. Each NMR spectrum was data-reduced to pro
vide 256 intensity-related descriptors of the spectra. Data correspond
ing to the periods 8-24 h, 24-32 h and 32-56 h post-dose were first an
alysed using principal components analysis (PCA). In addition, samples
obtained 120-144 h following the administration of adriamycin and pur
omycin were included in the analysis in order to compensate for the fa
te onset of glomerular toxicity. Having established that toxin-related
clustering behaviour could be detected in the first three principal c
omponents (PCs), three-quarters of the data were used to construct a s
oft independent modelling of class analogy (SIMCA) model. The remainde
r of the data were used as a test set of the model. Only three out of
61 samples in the test set were misclassified. Finally as a further te
st of the model, data from the H-1 NMR spectra of urine from rats that
had been treated with uranyl nitrate were used. Successful prediction
of the toxicity type of the compound was achieved based on NMR urinal
ysis data confirming the robust nature of the derived model. (C) 1998
John Wiley & Sons, Ltd.