Mk. Williams et al., A SINGLE MUTATION IN THE REGULATORY CHAIN OF ESCHERICHIA-COLI ASPARTATE TRANSCARBAMOYLASE RESULTS IN AN EXTREME T-STATE STRUCTURE, Journal of Molecular Biology, 281(1), 1998, pp. 121-134
Kinetic analysis of a mutant version of Escherichia coli aspartate tra
nscarbamoylase in which Thr82 in the regulatory chain (Thr82r) was rep
laced by Ala results in a shift in the T reversible arrow R equilibriu
m towards the T-state. In order to understand the structural determina
nts of this T-state stabilization, the X-ray structure of the unligand
ed Thr82r --> Ala enzyme was determined at 2.6 Angstrom resolution and
refined to a crystallographic residual of 0.175. The structure of the
mutant r1 regulatory chain is more similar to that of the r6 regulato
ry chain than observed for the wild-type enzyme, resulting in a more s
ymmetric structure. Furthermore, the structural changes in the mutant
enzyme appears to occur only in the r1 chain, while the r6 chain is al
most identical in structure to that of the r6 chain of the wild-type e
nzyme. The structure of the mutant enzyme exhibits alterations in the
subunit interfaces between the regulatory and catalytic chains, as wel
l as in the interface between the allosteric and zinc domains within t
he regulatory chain. Moreover, the regulatory dimers are rotated aroun
d their respective 2-fold axes approximately 1 degrees beyond the rota
tion which occurs in the wild-type T-state enzyme. The structural anal
ysis indicates that the enzyme is an ''extreme'' T-state, in which a l
arger rotation of the regulatory dimers is required for the T to R tra
nsition compared to the wild-type enzyme. This extreme T-state structu
re correlates well with the kinetic parameters determined for the muta
nt enzyme, showing a stabilized T-state. Furthermore, the structural a
nalysis of the mutant enzyme suggests that replacement of Thr82r with
Ala alters the local conformation of the nucleotide binding pocket and
therefore offers a plausible explanation for the reduced affinity of
the enzyme for nucleotides. (C) 1998 Academic Press