Ks. Kostov et al., DYNAMICS OF LINEAR AND BRANCHED ALKANE MELTS - MOLECULAR-DYNAMICS TEST OF THEORY FOR LONG-TIME DYNAMICS, The Journal of chemical physics, 108(21), 1998, pp. 9155-9167
Molecular dynamics (MD) simulations of united atom models for alkane m
elts are compared with a recently developed theory for calculating the
memory functions of flexible polymers. The theory is based upon an ap
proximate solution of the diffusion equation without hydrodynamic inte
ractions. The polymer dynamics are described by using time correlation
functions which are expressed in terms of a set of equilibrium averag
es and the approximate eigenvalues and eigenfunctions of the diffusion
operator. For flexible enough chains with sufficiently high molecular
weight, the hydrodynamic interactions are screened, and the simplifie
d solvent model used by the theory is expected to be adequate. The onl
y parameter not defined by the MD simulations is the bead friction coe
fficient zeta. In the limit of weak hydrodynamic interactions (Rouse d
ynamics), zeta can be determined from the molecular diffusion coeffici
ent by applying the Rouse relation D = kT/N zeta(R). Given this choice
of zeta(R), the time correlation functions computed from the theory a
re compared with those obtained directly from the MD simulations. Exce
llent agreement with the simulations is found for all correlation func
tions and all times for the decane dynamics, provided the theory emplo
ys one scale factor to increase zeta(R) and, hence, to compensate for
the inadequacy of the Rouse relation. The same picture holds for hexad
ecane and triacontane (C30H62) but With Smaller scale factors. Scaling
becomes unnecessary for C44H90 which is long enough for the crossover
to Rouse dynamics for D to be almost complete. Very good agreement (a
fter appropriate scaling of zeta(R)) also emerges between theory and s
imulations for several branched alkanes with carbon numbers C-25-C-30.
Computations for hexadecane at different temperatures show that the s
cale factors may be weakly temperature dependent. (C) 1998 American In
stitute of Physics. [S0021-9606(98)50921-X].