L. Gutman et E. Shakhnovich, PHASE-DIAGRAM ANALYSIS OF RANDOM HETEROPOLYMERS WITH COMPOSITION SPECIFIC AND QUENCHED CROSS-LINKS, The Journal of chemical physics, 109(7), 1998, pp. 2947-2958
We study the conformational organization of a novel class of soft matt
er, random heteropolymers (RHPs) with composition specific and quenche
d cross-links by replica field theory. These technologically relevant
materials carry an essentially quenched sequence distribution of dispa
rate segments, and also a fixed distribution of composition specific c
ross-links. The chain connectivity of the linear RHPs is captured most
generally by a continuous microscopic RHP Hamiltonian, while the quen
ched character of the cross-links is enforced by spatial constraints o
n segments of a prescribed composition, and by allowing fluctuations i
n the total number of composition specific cross-links around an exper
imentally controlled average. The replica theory, a formalism widely u
sed in the study of linear RHPs, is extended in the present work to an
alysis of systems with multiform disorder that have interdependent dis
order components. By numerically analyzing the free energy and its sta
bility we predict the occurrence of frozen phase formation wherein few
conformations are sampled. By systematically varying the sequence/cro
ss-link fluctuations, temperature, and the RHP interaction parameters
we show that two conformational transitions can occur in the frozen ph
ase. The low temperature conformational transition resembles to a larg
e extent the reduction in chain conformations which occurs during the
folding of proteins with fixed disulfide bonds. The frozen phase domai
n microstructure formation is discussed in context of the recently elu
cidated phase diagram of a close related system, RHPs with annealed cr
oss-links. Explicit connection is made with possible experiments and c
omputer simulations methods to test our predictions. (C) 1998 American
Institute of Physics.