Acm. Gillies et Rj. Abbott, EVALUATION OF RANDOM AMPLIFIED POLYMORPHIC DNA FOR SPECIES IDENTIFICATION AND PHYLOGENETIC ANALYSIS IN STYLOSANTHES (FABACEAE), Plant systematics and evolution, 211(3-4), 1998, pp. 201-216
Random amplified polymorphic DNA (RAPD) was assessed for its suitabili
ty as a tool to be used in the identification of taxa from the genus S
tylosanthes (Fabaceae, Papilionoideae, Aeschynomeneae). Five random pr
imers were used to 'fingerprint' accessions from seven species in the
genus, and generated RAPD profiles that were species-specific, Data we
re used to examine evolutionary relationships between taxa, employing
both clustering and ordination techniques, and the results were compar
ed with those from a previous cladistic analysis of chloroplast DNA (c
pDNA) restriction fragments. Both multivariate approaches indicated re
lationships that were generally similar to those obtained by RFLP anal
ysis of cpDNA. However, while cluster analysis grouped together all ac
cessions within species, ordination placed certain accessions of S. hu
milis, S. macrocephala and S. capitata into separate groups. Experimen
ts to test the assumed homology of comigrating RAPDs estimated 85.7% h
omology for accessions within species, and 53.8% homology for accessio
ns between species. The value of RAPD data in systematics is discussed
.