Ma. Jairajpuri et al., CHARGE AND SOLVATION EFFECTS IN ANION RECOGNITION CENTERS - AN INQUIRY EXPLOITING REACTIVE ARGININES, Biochemistry, 37(30), 1998, pp. 10780-10791
Following a long-standing suggestion of Riordan et al. [Riordan, J. F.
, McElvany, K. D., and Borders, C. L., Jr. (1977) Science 195, 884-885
], we sought to exploit chemically activated arginines as probes to ch
aracterize the microenvironnental effects in enzymes that mediate the
recognition of anionic substrates. A micellar simulation study establi
shes that octylguanidine (OGn) becomes chemically activated upon incor
poration into both cetyltrimethylammonium bromide (CTAB) and Triton X-
100 micelles and that the activations correlate with the pK(a) diminut
ions induced in its guanidiniun,group by the effects of electrostatic
or nonelectrostatic nature as reflected in the results of pH and salt
titration experiments. Next, a protein modification study establishes
that the modifiable arginines in a number of enzymes also have diminis
hed pK(a)'s, again due to effects of electrostatic or nonelectrostatic
nature as reflected in the results of pH and salt titration experimen
ts. Warwicker's finite difference Poisson-Boltzmann algorithm [Warwick
er, J. (1992) J. Mol. Biol. 223, 247-257] is applied to several of the
enzymes with available crystal structure coordinates, and indeed, the
ir chemically activated arginines are found to be in an electrostatic
microenvironment that can diminish their pK(a)'s, with the magnitudes
of these diminutions matching closely the diminutions measured experim
entally. Finally, the chemically activated arginines are examined with
respect to their atomic atmosphere and are thus found to occur in a l
ocal microenvironment that would facilitate their roles as anion ancho
rs. Thus, electrostatic and solvation effects are found to be critical
determinants of the arginine role as an anion anchor.