M. Lisby et al., CAMPTOTHECINS INHIBIT THE UTILIZATION OF HYDROGEN-PEROXIDE IN THE LIGATION STEP OF TOPOISOMERASE-I CATALYSIS, Biochemistry, 37(30), 1998, pp. 10815-10827
The antitumor compounds camptothecin and its derivatives topotecan and
irinotecan stabilize topoisomerase I cleavage complexes by inhibiting
the religation reaction of the enzyme. Previous studies, using radiol
abeled camptothecin or affinity labeling reagents structurally related
to camptothecin, suggest that the agent binds at the topoisomerase I-
DNA interface of the cleavage complexes, interacting with both the cov
alently bound enzyme and with the +1 base. In this study, we have inve
stigated the molecular mechanism of camptothecin action further by tak
ing advantage of the ability of topoisomerase I to couple non-DNA nucl
eophiles to the cleaved strand of the covalent enzyme-DNA complexes. T
his reaction of topoisomerase I was originally observed at moderate ba
sic pH where active cleavage complexes mediate hydrolysis or alcoholys
is by accepting water or polyhydric alcohol compounds as substitutes f
or a 5'-OH DNA end in the ligation step. Here, we report that a H2O2-d
erived nucleophile, presumably, the peroxide anion, facilitates the re
lease of topoisomerase I from the cleavage complexes at neutral pH, an
d we present evidence showing that this reaction is mechanistically an
alogous to DNA ligation. We find that camptothecin, topotecan, and SN-
38 (the active metabolite of irinotecan) inhibit H2O2 ligation mediate
d by cleavage complexes not containing DNA downstream of the cleavage
site, indicating that drug interaction with DNA 3' to the covalently b
ound enzyme is not strictly required for the inhibition, although the
presence of double-stranded DNA in this region enhances the drug effec
t. The results suggest that camptothecins prevent ligation by blocking
the active site of the covalently bound enzyme.