HYDROLYSIS OF N-SUCCINYL-L,L-DIAMINOPIMELIC ACID BY THE HAEMOPHILUS-INFLUENZAE DAPE-ENCODED DESUCCINYLASE - METAL ACTIVATION, SOLVENT ISOTOPE EFFECTS, AND KINETIC MECHANISM
Tl. Born et al., HYDROLYSIS OF N-SUCCINYL-L,L-DIAMINOPIMELIC ACID BY THE HAEMOPHILUS-INFLUENZAE DAPE-ENCODED DESUCCINYLASE - METAL ACTIVATION, SOLVENT ISOTOPE EFFECTS, AND KINETIC MECHANISM, Biochemistry, 37(29), 1998, pp. 10478-10487
Hydrolysis of N-succinyl-L,L-diaminopimelic acid by the dapE-encoded d
esuccinylase is required for the bacterial synthesis of lysine and mes
o-diaminopimelic acid, We have investigated the catalytic mechanism of
the recombinant enzyme from Haemophilus influenzae. The desuccinylase
was overexpressed in Escherichia coli and purified to homogeneity. St
eady-state kinetic experiments verified that the enzyme is metal-depen
dent, with a K-m, for N-succinyl-L,L-diaminopimelic acid of 1.3 mM and
a turnover number of 200 s(-1) in the presence of zinc. The maximal v
elocity was independent of pH above 7 bur decreased with a slope of 1
below pH 7. The pH dependence of V/K was bell-shaped with apparent pKs
of 6.5 and 8.3. Both L,L- and D,L-diaminopimelic acid were competitiv
e inhibitors of the substrate, but D,D-diaminopimelic acid was not. So
lvent kinetic isotope effect studies yielded inverse isotope effects,
with values for V-D2O/K of 0.62 and V-D2O of 0.78. Determination of me
tal stoichiometry by ICP-AES indicated one tightly bound metal ion, wh
ile sequence homologies suggest the presence of two metal binding site
s. On the basis of these observations, we propose a chemical mechanism
for this metalloenzyme, which has a number of important structurally
defined homologues.