Zh. Zeng et al., CRYSTAL-STRUCTURE OF POKEWEED ANTIVIRAL PROTEIN FROM SEEDS OF PHYTOLACCA-AMERICANA AT 0.25 NM, SCIENCE IN CHINA SERIES C-LIFE SCIENCES, 41(4), 1998, pp. 413-418
Crystals of pokeweed antiviral protein (PAP) from seeds of Phytolacca
americana with high diffraction ability were grown from high protein c
oncentration (100 mg/mL) solution at high temperature (33 degrees C).
The crystal structure was solved by use of molecular replacement metho
d and refined by use of molecular dynamic method at 0.25 nm to an R fa
ctor of 18.15% with standard deviations from standard geometry of 0.00
1 6 nm and 2.04 degrees for bond lengths and bond angles, respectively
. Comparison with two other PAPs revealed, near the active center, a s
equence and structure-variable region, consisting of the loop connecti
ng the fifth beta-strand with the second a-helix and including a propo
sed active residue, suggesting this loop probably to be related to dif
ference in activity.