C. Edwards et al., MICROBIOLOGICAL PROCESSES IN THE TERRESTRIAL CARBON-CYCLE - METHANE CYCLING IN PEAT, Atmospheric environment, 32(19), 1998, pp. 3247-3255
Coring and cutting devices were developed to extract 30 cm cores;from
pear under conditions which preserve their physical/spatial integrity,
maintain anoxic conditions and allow transverse sectioning. Methane p
roduction potential, measured on 1-2 cm vertical sections, was broadly
absent from the upper 5 cm, maximum in the next 10 cm and thereafter
declined. Methane oxidation potential was maximum in the upper 10 cm a
nd thereafter detected in reducing amounts. Molecular methods, based o
n the extraction of total DNA and its PGR amplification and hybridisat
ion with specific phylogenetic 16S rRNA and functional gene specific p
rimers and probes, were developed to analyse the methane producing and
methane oxidising microbial communities. The functional gene sequence
s were based on methanogen methyl coenzyme reductase and methanotroph
methane monooxygenase. Methanotrophs are located throughout the core w
hereas methanogens are restricted to the lower zones. The composition
of the microbial communities is however complex consisting of a number
of novel species not previously recognised and with the various speci
es/sub-groups occupying different vertical zones. (C) 1948 Elsevier Sc
ience Ltd. All rights reserved.