The muscular dystrophy protein, dystrophin, and the closely related pr
otein, utrophin, are large cytoskeletal proteins which link actin micr
ofilaments to the plasma membrane. A panel of 38 monoclonal antibodies
(mAbs) has been produced against the C-terminal domains of dystrophin
and utrophin, This domain interacts with both dystrobrevins, via thei
r ''leucine zipper'' coiled-coil helices, and syntrophins, adaptor pro
teins which also interact with nitric oxide synthetase and transmembra
ne sodium channels. The amino acid sequences recognized by the mAbs ha
ve now been identified using a variety of epitope mapping techniques,
including fragmentation by transposon mutagenesis, synthetic peptides,
phage-displayed peptide libraries, and mutant dystrophins expressed i
n transgenic mice. In addition to defining antibody recognition sites,
mapping was sufficiently precise to provide structural information, s
ince individual amino acids accessible on the surface of the native pr
otein were identified in many cases. In two regions of the domain, sho
rt linear epitopes were found in proline-rich sequences which may form
surface loops, turns, or linkers, but these were separated by a third
region which contained mainly conformational epitopes. The results ar
e consistent with a loose and flexible structure for much of the C-ter
minal domain, especially around the highly conserved second leucine zi
pper or coiled-coil helix (CC-H2), but there is evidence for denaturat
ion-resistant tertiary structure in the syntrophin-binding region and
the first coiled-coil helix (CC-H1).