Dl. Harris et Gh. Loew, THEORETICAL INVESTIGATION OF THE PROTON ASSISTED PATHWAY TO FORMATIONOF CYTOCHROME-P450 COMPOUND-I, Journal of the American Chemical Society, 120(35), 1998, pp. 8941-8948
Functional and dysfunctional enzymatic pathways of cytochrome P450s af
ter formation of the reduced ferrous dioxygen species have been invest
igated using nonlocal density functional quantum chemical methods, emp
loying a methyl mercapto iron porphine model of the cytochrome P450 he
me complex. The goal of this study was to assess the validity of propo
sed pathways to both compound I and peroxide involving protonation of
the distal and proximal oxygen atoms of the reduced ferrous dioxygen s
pecies. Optimized geometries, energies, and electrostatic and electron
ic properties of each putative heme intermediate in these pathways wer
e calculated and these properties examined for consistency with the pr
oposed role of the intermediate in compound I or peroxide formation. S
ingle protonation of the distal oxygen resulted in significant weakeni
ng of the O-O bond. Addition of a second proton to the distal oxygen a
nd energy optimization led directly to compound I and water products,
without any apparent activation barrier or formation of a diprotonated
intermediate. These results provide direct robust support for the pro
ton-assisted mechanism of dioxygen bond cleavage to form compound I. T
he dysfunctional pathway to the formation of peroxide was explored by
examining the properties of the distal and proximal singly protonated
species. The proximal tautomer is thermodynamically less favorable tha
n the distal species by 18.4 kcal/mol. Electrostatic features of both
singly protonated species suggest preferred proton delivery to the rem
aining unprotonated oxygen in each case, favoring peroxide formation.
Moreover, addition of a second proton to either of these singly proton
ated species results in formation of a stable hydrogen peroxide heme c
omplex. These results, taken together, suggest that the simultaneous a
vailability of two protons on the distal oxygen is a requirement for P
450 enzymatic efficacy, while asynchronous delivery of protons to the
dioxygen site favors decoupling.