Ml. Clawson et al., DIVERSITY OF FRANKIA STRAINS IN ROOT-NODULES OF PLANTS FROM THE FAMILIES ELAEAGNACEAE AND RHAMNACEAE, Applied and environmental microbiology, 64(9), 1998, pp. 3539-3543
Partial 16S ribosomal DNAs (rDNAs) were PCR amplified and sequenced fr
om Frankia strains living in root nodules of plants belonging to the f
amilies Elaeagnaceae and Rhamnaceae, including Colletia hystrix, Elaea
gnus angustifolia, an unidentified Elaeagnus sp., Talguenea quinquener
via, and Trevoa trinervis. Nearly full length 16S rDNAs were sequenced
from strains of Frankia living in nodules of Ceanothus americanus, C.
hystrix, Coriaria arborea, and Trevoa trinervis. Partial sequences al
so were obtained from Frankia strains isolated and cultured from the n
odules of C. hystrix, Discaria serratifolia, D. trinervis, Retanilla e
phedra, T. quinquenervia, and T. trinervis (Rhamnaceae). Comparison of
these sequences and other published sequences of Frankia 16S rDNA rev
eals that the microsymbionts and isolated strains from the two plant f
amilies form a distinct phylogenetic clade, except for those from C. a
mericanus. All sequences in the clade have a common 2-base deletion co
mpared with other Frankia strains. Sequences from C. americanus nodule
s lack the deletion and cluster with Frankia strains infecting plants
of the family Rosaceae. Published plant phylogenies (based on chloropl
ast rbcL sequences) group the members of the families Elaeagnaceae and
Rhamnaceae together in the same clade. Thus, with the exception of C.
americanus, actinorhizal plants of these families and their Frankia m
icrosymbionts share a common symbiotic origin.