Higher-plant, green and red algal chloroplasts are surrounded by a dou
ble membrane envelope. The glaucocystophyte plastid (cyanelle) has ret
ained a prokaryotic cell wall between the two envelope membranes. The
complex chloroplasts of Euglena and dinoflagellates are surrounded by
three membranes while the complex chloroplasts of chlorarachniophytes,
cryptomonads, brown algae, diatoms and other chromophytes, are surrou
nded by 4 membranes. The peptidoglycan layer of the cyanelle envelope
and the additional membranes of complex chloroplasts provide barriers
to chloroplast protein import not present in the simpler double membra
ne chloroplast envelope. Analysis of presequence structure and in vitr
o import experiments indicate that proteins are imported directly from
the cytoplasm across the two envelope membranes and peptidoglycan lay
er into cyanelles. Protein import into complex chloroplasts is however
fundamentally different. Analysis of presequence structure and in vit
ro import into microsomal membranes has shown that translocation into
the ER is the first step for protein import into complex chloroplasts
enclosed by three or four membranes. In vivo pulse chase experiments a
nd immune electronmicroscopy have shown that in Euglena, proteins are
transported from the ER to the Golgi apparatus prior to import across
the three chloroplast membranes. Ultrastructural studies and the prese
nce of ribosomes on the outermost of the four envelope membranes sugge
sts protein import into 4 membrane-bounded complex chloroplasts is dir
ectly from the ER like outermost membrane into the chloroplast. The fu
ndamental difference in import mechanisms, posttranslational direct ch
loroplast import or co-translational translocation into the ER prior t
o chloroplast import, appears to reflect the evolutionary origin of th
e different chloroplast types. Chloroplasts with a two-membrane envelo
pe are thought to have evolved through the primary endosymbiotic assoc
iation between a eukaryotic host and a photosynthetic prokaryote while
complex chloroplasts are believed to have evolved through a secondary
endosymbiotic association between a heterotrophic or possibly phototr
ophic eukaryotic host and a photosynthetic eukaryote.