This review considers primary mitochondrial diseases affecting the res
piratory chain. As diseases due to mitochondrial DNA defects defy trad
itional anatomical classifications, we have not limited our discussion
to neuromuscular disorders, but have extended it to include mitochond
rial encephalomyopathies. Primary mitochondrial diseases can be due to
mutations in either the nuclear or the mitochondrial genome. Nuclear
mutations can affect (i) genes encoding enzymatic or structural mitoch
ondrial proteins; (ii) translocases; (iii) mitochondrial protein impor
tation; and (iv) intergenomic signaling. We review briefly recent mole
cular data and outstanding questions regarding these mendelian disorde
rs, with special emphasis on cytochrome c oxidase deficiency and coenz
yme Q10 deficiency. Mitochondrial DNA mutations fall into three main c
ategories: (i) sporadic rearrangements (deletions/duplications); (ii)
maternally inherited rearrangements (duplications); and (iii) maternal
ly inherited point mutations. We summarize the most common clinical pr
esentations and discuss pathogenic mechanisms, which remain largely el
usive. Uncertainties about pathogenesis extend to the process of cell
death, although excitotoxicity in neurons and apoptosis in muscle seem
to have important roles. (C) 1998 Elsevier Science B.V. All rights re
served.