QUANTUM-CHEMICAL STUDY OF RELATIVE STABILITY, ELECTRIC-FIELD GRADIENTS AT NITROGEN-ATOMS, ROTATIONAL-CONSTANTS AND ELECTRIC-DIPOLE MOMENTS OF ALL URACIL, THYMINE AND CYTOSINE ISOMERS
Tk. Ha et Hh. Gunthard, QUANTUM-CHEMICAL STUDY OF RELATIVE STABILITY, ELECTRIC-FIELD GRADIENTS AT NITROGEN-ATOMS, ROTATIONAL-CONSTANTS AND ELECTRIC-DIPOLE MOMENTS OF ALL URACIL, THYMINE AND CYTOSINE ISOMERS, Journal of molecular structure, 300, 1993, pp. 619-635
For four uracil and five cytosine isomeric forms, fully optimized quan
tum chemical structural data computed at the HF/6-31* level of approx
imation are reported. Effects of electron correlation (based on pointw
ise MP2/HF/6-31G* calculations) on the relative energies of all 13 is
omers of uracil and thymine and all 14 isomers of cytosine are investi
gated. Principal values of electric field gradients at N atoms in the
1 and 3 positions of the ring and of the amino/imino substituent in th
e 6 position of cytosine, rotational constants and electric dipole mom
ents were determined for all isomers at the same level of theory. An a
ttempt to characterize attractive interactions between hydroxy (imino)
substituents and lone pair electrons centered at adjacent N atoms (a
hitherto unrecognized ''intramolecular H-bond'') by means of electron
density, difference electron density, field lines of the gradient and
a contour map of the Laplacian of the electron density is presented. E
lectric field gradient tensors and their asymmetry parameters are show
n to be correlated in a characteristic manner with repulsive and attra
ctive interactions. These interactions were recently found to be conne
cted in a simple manner with conversion energies of geometric isomers
of tautomeric forms of the three pyrimidine nucleic acid bases.