L. Zhu et al., TRANSITION-METAL COMPLEXES AS ALTERNATIVES TO PROTEOLYTIC-ENZYMES - REGIOSELECTIVE CLEAVAGE OF MYOGLOBIN BY PALLADIUM(II) AQUA COMPLEXES, JBIC. Journal of biological inorganic chemistry, 3(4), 1998, pp. 383-391
The palladium(II) aqua complexes [Pd(H2O)(4)](2+), cis-[Pd(en)(H2O)(2)
](2+), and cis-[Pd(dtco-OH)(H2O)(2)](2+) effect hydrolytic cleavage of
horse myoglobin in aqueous solution. The conditions were optimized wi
th the third complex. Its structure was determined by X-ray crystallog
raphic analysis of its precursor, the square-planar complex cis-[Pd(dt
co-OH)Cl-2], in which the chelating ligand adopts a boat-chair conform
ation. A weak interaction between the hydroxyl group and the palladium
(II) atom seems to improve the stability of the reagent. The yield of
cleavage after a 24-h incubation at 60 degrees C increases from 39% to
85% as the pH decreases from 6.2 to 3.2. The protein fragments are se
parated by SDS-PAGE electrophoresis and HPLC separation methods, and i
dentified by ESIMS and MALDI-TOF mass spectrometric methods and by det
ermination of terminal amino-acid sequences. Most of the 13 cleavage s
ites are clustered around the methionine, arginine, and some of the hi
stidine residues, whose side chains can bind to palladium(II). Cleavag
e tends to occur at the peptide bonds one to three positions removed f
rom the binding residues; the scissile bonds usually lie on the amino-
terminal side, seldom on the carboxy-terminal side, of the binding res
idues. Removal of the heme and unfolding of the protein do not drastic
ally alter the pattern of cleavage; The ability of palladium(II) aqua
complexes to cleave proteins at relatively few sites, with explicable
selectivity, with good to very good yield, and in weakly acidic and ne
arly neutral solutions, bodes well for their future use in biochemical
and bioanalytical practice.