TAXONOMIC REARRANGEMENTS OF THE GENERA THIOCAPSA AND AMOEBOBACTER ON THE BASIS OF 16S RDNA SEQUENCE ANALYSES, AND DESCRIPTION OF THIOLAMPROVUM GEN. NOV
R. Guyoneaud et al., TAXONOMIC REARRANGEMENTS OF THE GENERA THIOCAPSA AND AMOEBOBACTER ON THE BASIS OF 16S RDNA SEQUENCE ANALYSES, AND DESCRIPTION OF THIOLAMPROVUM GEN. NOV, International journal of systematic bacteriology, 48, 1998, pp. 957-964
Complete nucleotide sequences of the 16S rDNAs were determined from Th
iocapsa and Amoebobacter species, including all available type strains
and some additional isolates. The distance-matrix analysis and the de
ndrogram for estimating the genetic relationships revealed that the in
vestigated strains were found in two major clusters within the Chromat
iaceae. One cluster comprises all Amoebobacter species, Thiocapsa rose
opersicina and several isolates related to Thiocapsa roseopersicina. R
epresentatives of the species Amoebobacter roseus, Amoebobacter penden
s and Thiocapsa roseopersicina, the so called 'Thiocapsa roseopersicin
a group', are very closely related, justifying their inclusion into on
e genus, Thiocapsa, for which an emended description is presented. Amo
ebobacter purpureus and Amoebobacter pedioformis formed two separate l
ines of descent with less than 93% (89.6-92.9%) similarity to strains
of the 'Thiocapsa roseopersicina group'. Therefore, they will be consi
dered as two separate genera. As a consequence, an emended description
is presented for the genus Amoebobacter, with Amoebobacter purpureus
as the new type species and A. pedioformis is transferred to Thiolampr
ovum pedioforme gen. nov., comb. nov. Two species, Thiocapsa pfennigii
and Thiocapsa halophila, which have been classified with the genus Th
iocapsa because of their morphological properties, were found within a
nother major cluster of the Chromatiaceae and are only distantly phylo
genetically related to the first cluster with 88.4-90.6 % and 90.4-92.
2 % sequence similarity, respectively.