The ascaridoid nematode of cats from Kuala Lumpur, Malaysia. previousl
y identified morphologically as Toxocara canis, was characterized usin
g a molecular approach. The nuclear ribosomal DNA (rDNA) region spanni
ng the first internal transcribed spacer (ITS-1), the 5.8S gene and th
e second internal transcribed spacer (ITS-2) was amplified and sequenc
ed. The sequences for the parasite from Malaysian cats were compared w
ith those for T. canis and T. cati. The sequence data showed that this
taxon was genetically more similar to T. cati than to T. canis in the
ITS-1, 5.8S and ITS-2. Differences in the ITS-1 and ITS-2 sequences b
etween the taxa (9.4-26.1%) were markedly higher than variation betwee
n samples within T. canis and T. cati (0-2.9%). The sequence data demo
nstrate that the parasite from Malaysian cats is neither T. canis nor
T. cati and indicate that it is a distinct species. Based on these dat
a, PCR-linked restriction fragment length polymorphism (RFLP) and sing
le-strand conformation polymorphism (SSCP) methods were employed for t
he unequivocal differentiation of the Toxocara variant from T. canis a
nd T. cati. These methods should provide valuable tools for studying t
he life-cycle, transmission pattern(s) and zoonotic potential of this
parasite.