X-ray and electron crystallography of polymethylene chain compounds ar
e known to be hindered by the very strong scattering from a dominant s
ublattice, and the use of high-resolution electron microscopy is sever
ely limited by radiation damage. This study shows that these problems
may be overcome by using high-resolution atomic force microscopy (AFM)
imaging. The work was performed on four types of linear alkane crysta
l, namely n-C26H54, n-C30H62, n-C36H74 and n-C44H90, of different mole
cular lengths. They were prepared by vapour deposition and from soluti
on and deposited on mica and on highly oriented pyrolytic graphite. Th
e results show that firstly AFM may complement, at a molecular and a s
ubmolecular level, the data provided by X-ray and electron crystallogr
aphy, secondly alkane crystals may be prepared with different orientat
ions and the type of substrate has no influence, and thirdly AFM may b
e used to induce orientational and conformational changes.