Genetic susceptibility to primary sclerosing cholangitis (PSC) is asso
ciated with the extended HLA A1-B8-DR3 haplotype and also with the DRB
30101-DRB1*0301-DQA1*0103-DQB1*0603 haplotype. However, very few stud
ies have considered the role of HLA C which lies between HLA A and B,
is highly polymorphic, and encodes proteins which play an important ro
le in immunoregulation and in disease susceptibility Traditional assig
nment of HLA Cw antigens by serology is both inaccurate and unreliable
, with a high error rate. The aim of this study was to characterize th
e distribution of HLA C alleles in a large group of patients with prim
ary sclerosing cholangitis by using a recently developed polymerase ch
ain reaction-based genotyping technique, Ninety-three white adult pati
ents of northern European origin with well characterized PSC and 100 g
eographically and racially matched controls were studied. HLA C and HL
A DRB1 alleles were assigned by polymerase chain reaction-based genoty
ping, HLA A and B antigens by standard microlymphocytotoxicity test an
d extended haplotypes were constructed according to known patterns of
linkage disequilibrium. The Cw07 gene was found in 67.7% of patients
versus 54% of controls (P = .051, OR = 1.79), This increase was a resu
lt of inheritance of the Cw0701 allele which was found in 51.6% of pa
tients compared with 34% of controls (P = .013, OR = 2.07). There were
no significant differences in the frequencies of any of the other Cw
alleles including the Cw07 group: Cw*0702, Cw*0703, and Cw*0704. HLA-
encoded genetic susceptibility to PSC is associated with the HLA Cw07
01 allele, but the association is weak and may simply reflect linkage
disequilibrium with the HLA B8-DR3 haplotype, These findings indicate
that the telomeric limit of HLA-encoded susceptibility to primary scle
rosing cholangitis lies close to the HLA C locus.