C. Cruzneira et al., INTERACTIVE MOLECULAR MODELING WITH VIRTUAL-REALITY AND EMPIRICAL ENERGY SIMULATIONS, SAR and QSAR in environmental research (Print), 9(1-2), 1998, pp. 39-51
Virtual reality tightly coupled to high performance computing and comm
unications ushers in a new era for the study of molecular recognition
and the rational design of pharmaceutical compounds. We have created a
combined virtual reality and molecular dynamics method, which consist
s of (1) massively parallel computing to simulate the physical and che
mical properties of a molecular system, (2) the Cave Automatic Virtual
Environment (CAVE) for immersive display and interaction with the mol
ecular system, and (3) a high-speed network interface to exchange data
between the simulation and the CAVE. This system enables molecular sc
ientists to have a visual, auditory, and haptic experience with a chem
ical system, while simultaneously manipulating its physical properties
by steering, in real-time, a simulation executed on a supercomputer.