TOWARDS LINEAR SCALING IN CONTINUUM SOLVENT MODELS - A NEW ITERATIVE PROCEDURE FOR ENERGIES AND GEOMETRY OPTIMIZATIONS

Citation
N. Rega et al., TOWARDS LINEAR SCALING IN CONTINUUM SOLVENT MODELS - A NEW ITERATIVE PROCEDURE FOR ENERGIES AND GEOMETRY OPTIMIZATIONS, Chemical physics letters, 293(3-4), 1998, pp. 221-229
Citations number
27
Categorie Soggetti
Physics, Atomic, Molecular & Chemical
Journal title
ISSN journal
00092614
Volume
293
Issue
3-4
Year of publication
1998
Pages
221 - 229
Database
ISI
SICI code
0009-2614(1998)293:3-4<221:TLSICS>2.0.ZU;2-X
Abstract
We present a new implementation of the polarizable continuum model, wh ich allows the computation of solvation energies and their gradients f or large systems. This is obtained by a balanced two-term iterative pr ocedure free from any N-3 computational bottleneck and from any N-2 St orage requirement, N being the number of finite elements used to descr ibe the cavity occupied by the solute. Comparison with the results obt ained by the standard matrix-inversion algorithm for small and medium- sized systems shows that the new algorithm couples a fully satisfactor y numerical accuracy with remarkable computational efficiency. (C) 199 8 Elsevier Science B.V. All rights reserved.