The genome of temperate mycobacteriophage L5 integrates into the chrom
osomes of its hosts, including Mycobacterium smegmatis, Mycobacterium
tuberculosis and bacille Calmette-Guerin. This integrase-mediated site
-specific recombination reaction occurs between the phage attP site an
d the mycobacterial affB site and requires the mycobacterial integrati
on host factor. Here we examine the role of supercoiling in this react
ion and show that integration is stimulated by DNA supercoiling but th
at supercoiling of either the attP or the attB substrate enhances reco
mbination. Supercoiling thus facilitates a postsynaptic recombination
event. We also show that, while supercoiling is not required for the p
roduction of a recombinagenic intasome, a mutant attP DNA deficient in
binding of the host factor acquires a dependence on supercoiling for
intasome formation and recombination.