The presumptive first step in the Rad51-promoted formation of joint mo
lecules is binding of the protein to ssDNA in the presence of ATP and
Mg2+. In this paper, we report that Rad51's ability to bind DNA is rap
idly inactivated when incubated at 30-37 degrees C but is stabilized b
y the presence of ATP and Mg2+. Although unable to promote binding to
DNA, ATP-gamma-S also prevents inactivation of Rad51 at 37 degrees C.
AMP-P-N-P lacks this property, while ADP protects partially but only a
t 5-10 times higher concentrations than ATP. These observations correl
ate with the dissociation constant of those nucleotides for Rad51 dete
rmined by equilibrium dialysis. Rad51 binds ATP and ATP-gamma-S with a
1:1 stoichiometry and K(d)s Of 21 and 19 mu M, respectively. The pres
ence of DNA significantly increases the affinity of Rad51 for ATP, whi
le DNA has a smaller effect on the affinity of ATP-gamma-S. Competitio
n binding studies show that ADP and AMP-P-N-P bind with a 5- and 55-fo
ld lower affinity, respectively, than ATP. The CD spectrum of Rad51 wi
th negative double minima at around 210 and 222 nm is characteristic o
f an alpha-helical protein. Upon binding ATP and Mg2+, the CD spectrum
is altered in the regions 194-208 and 208-235 nm, changes that are in
dicative of a more structured state; this change does not occur with R
ad51 that has been inactivated at 37 degrees C, We surmise that the ac
tive conformation is more resistant to inactivation at elevated temper
ature. Our data suggest that one of the roles of ATP and Mg2+ in Rad51
-mediated strand exchange is to induce the proper protein structure fo
r binding the two DNA substrates.