Ma. Kemper et al., DELTA-T14 DELTA-D15 AZOTOBACTER-VINELANDII FERREDOXIN-I - CREATION OFA NEW CYSXXCYSXXCYS MOTIF THAT LIGATES A [4FE-4S] CLUSTER/, Biochemistry (Easton), 37(37), 1998, pp. 12829-12837
In clostridial-type ferredoxins, each of the two [4Fe-4S](2+/+) cluste
rs receives three of its four ligands from a CysXXCysXXCys motif, Azot
obacter vinelandii ferredoxin I (AvFdI) is a seven-iron ferredoxin tha
t contains one [4Fe-4S](2+/+) cluster and one [3Fe-4S](+/0) cluster. D
uring the evolution of the 7Fe azotobacter-type ferredoxins from the 8
Fe clostridial-type ferredoxins, one of the two motifs present changed
to a CysXXCysXXXXCys motif, resulting in the inability to form a 4Fe
cluster and the appearance of a 3Fe cluster in that position. In a pre
vious study, we were unsuccessful in using structure as a guide in des
igning a 4Fe cluster in the 3Fe cluster position of AvFdI. In this stu
dy, we have reversed part of the evolutionary process by deleting two
residues between the second and third cysteines. UV/ Vis, CD, and EPR
spectroscopies and direct electrochemical studies of the purified prot
ein reveal that this Delta T14/Delta D15 FdI variant is an 8Fe protein
containing two [4Fe-4S](2+/+) clusters with reduction potentials of -
466 and -612 mV versus SHE. Whole-cell EPR shows that the protein is p
resent as an 8Fe protein in vivo. These data strongly suggest that it
is the sequence motif rather than the exact sequence or the structure
that is critical for the assembly of a 4Fe cluster in that region of t
he protein. The new oxygen-sensitive 4Fe cluster was converted in part
ial yield to a 3Fe cluster. In known ferredoxins and enzymes that cont
ain reversibly interconvertible [4Fe-4S](2+/+) and [3Fe-4S](+/0) clust
ers, the 3Fe form always has a reduction potential ca. 200 mV more pos
itive than the 4Fe cluster in the same position. In contrast, for Delt
a T14/Delta D15 FdI, the 3Fe and 4Fe clusters in the same location hav
e extremely similar reduction potentials.