Many processes, such as DNA replication, recombination and repair, pro
duce branched DNA structures. These bifurcated molecules are trimmed b
y a group of homologous 5'-3' exonucleases (also known as 5' nucleases
) in structure-specific cleavage reactions. X-ray crystallographical a
nd biochemical studies suggest that ssDNA substrates become threaded t
hrough the 5'-3' exonucleases, where hydrolysis is effected with the a
id of divalent metal cations.