Tw. Dreher et Jb. Goodwin, TRANSFER-RNA MIMICRY AMONG TYMOVIRAL GENOMIC RNAS RANGES FROM HIGHLY EFFICIENT TO VESTIGIAL, Nucleic acids research, 26(19), 1998, pp. 4356-4364
Three tRNA-associated properties of a representative set of tymoviral
RNAs have been quantitatively assessed using higher plant (wheat germ)
proteins: aminoacylation, EF-1 alpha . GTP binding, and 3'-adenylatio
n of 3'-CC forms of the RNAs by CTP, ATP:tRNA nucleotidyltransferase.
The RNAs fall into three classes differing in the extent of tRNA mimic
ry. Turnip yellow mosaic (TYMV) and kennedya yellow mosaic virus RNAs
had activities in all three properties similar to those of a higher pl
ant tRNA(Val) transcript, and thus are remarkable tRNA mimics. Althoug
h the isolated similar to 83 nt long tRNA-like structures showed high
activity in these assays, in the case of TYMV, the 6318 nt long TYMV R
NA was an even better substrate for valylation, Eggplant mosaic virus
RNA, which has a differently constructed acceptor stem pseudoknot, dif
fered from the above tymoviral RNAs in binding more weakly to EF-l alp
ha . GTP. Erysimum latent virus RNA, which lacks an identifiable antic
odon domain, could not be valylated and had very low 3'-adenylation ac
tivity. The range of tRNA mimicry within the tymovirus genus thus rang
es from extremely highly developed to minimal, The implications on the
role of the tRNA mimicry in viral biology are discussed.