J. Dong et al., Modulating electron density in the bound product, 4-hydroxybenzoyl-CoA, bymutations in 4-chlorobenzoyl-CoA dehalogenase near the 4-hydroxy group, BIOCHEM, 38(13), 1999, pp. 4198-4206
The enzyme 4-chlorobenzoyl-CoA dehalogenase hydrolyzes 4-chlorobenzoyl-CoA
(4-CBA-CoA) to 4-hydroxybenzoyl-CoA (4-HBA-CoA). Biochemical and crystallog
raphic studies have identified a critical role for the dehalogenase residue
Asp 145 in close proximity to the ligand's 4-hydroxy group in the structur
e of the product-enzyme complex. In the present study the effects of site s
elective mutations at Asp 145 on the product complex are explored by Raman
spectroscopy. The spectral signatures of the WT-product complex, the large
red shift in lambda(max), and the complete reorganization of the benzoyl ri
ng modes in Raman data are absent for the D145E complex. The major spectral
perturbations in the WT complex are brought about by strong electron "pull
" at the benzoyl carbonyl and electron "push" by the side chain of Asp 145
near the 4-OH group. Acting in concert, these factors polarize the benzoyl'
s pi-electrons. Since the Raman data show that very strong electron pull oc
curs at the benzoyl's carbonyl in the D145E complex, it is apparent that th
e needed electron push near the benzoyl's 4-OH group is missing. Thus, very
precise positioning of Asp 145's side chain near the benzoyl's 4-position
is needed to bring about the dramatic electron reorganization seen in the W
T complex, and this criterion cannot be met by the glutamate side chain wit
h its additional CH2 group. For two other Asp145 mutants D145A and D145S th
at lack catalytic activity, Raman difference spectroscopic data for product
complexes demonstrate the presence of a population of ionized product (i.e
., 4-O-) in the active sites. The presence of the ionized phenolate form ex
plains the observation that these complexes have highly red-shifted absorba
nce maxima with lambda(maxs) near 400 nm. For the WT complex only the 4-OH
form is seen, ionization being energetically expensive with the presence of
the proximal negative charge on the Asp 145 side chain. Semiquantitative e
stimates of the pK(a) for the bound product in D145S and D145A indicate tha
t this ionization lies in the pH 6.5-7.0 range. This is approximately 2 pH
units below the pK(a) for the free product. The Raman spectrum of 4-dimethy
laminobenzoyl-CoA undergoes major changes upon binding to dehalogenase. The
bound form has two features near 1562 and 1529 cm(-1) and therefore closel
y resembles the spectrum of product bound to wild-type enzyme, which underl
ines the quinonoid nature in these complexes. The use of a newly developed
Raman system allowed us to obtain normal (nonresonance) Raman data for the
dehalogenase complexes in the 100-300 mu M range and heralds an important a
dvance in the application of Raman spectroscopy to dilute solutions of macr
omolecules.