Mathematical models of metabolic pathways

Citation
J. Varner et D. Ramkrishna, Mathematical models of metabolic pathways, CURR OPIN B, 10(2), 1999, pp. 146-150
Citations number
58
Categorie Soggetti
Microbiology
Journal title
CURRENT OPINION IN BIOTECHNOLOGY
ISSN journal
09581669 → ACNP
Volume
10
Issue
2
Year of publication
1999
Pages
146 - 150
Database
ISI
SICI code
0958-1669(199904)10:2<146:MMOMP>2.0.ZU;2-6
Abstract
There have been recent advances in metabolic flux analysis. In particular, the marriage of traditional flux balancing with NMR isotopomer distribution analysis holds great promise for the detailed quantification of physiology . Nevertheless, flux analysis yields only static snap-shots of metabolism. To robustly predict the time evolution of metabolic networks, dynamic mathe matical models, especially those that contain a description of both gene ex pression as well as enzyme activity, must be utilized. When mechanistic con trol and regulatory information is not available, heuristic-based methods, such as the cybernetic framework, can be employed to describe the action of these control mechanisms. In the 'high-information' future, as more biolog ical information becomes available, such heuristic-based approaches can be replaced by mechanistic mass-action representations of physiology that stem directly from genetic sequence.